Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.27■□□□□ 0.35
Snx6Q6P8X1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Snx6Q6P8X1 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Gm22325-201ENSMUST00000158904 308 ntBASIC17.25■□□□□ 0.35
Snx6Q6P8X1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Snx6Q6P8X1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Snx6Q6P8X1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Gm6365-201ENSMUST00000054711 744 ntBASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Snx6Q6P8X1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.23■□□□□ 0.35
Snx6Q6P8X1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Snx6Q6P8X1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snx6Q6P8X1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snx6Q6P8X1 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.21■□□□□ 0.35
Snx6Q6P8X1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Snx6Q6P8X1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms