Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smchd1Q6P5D8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smchd1Q6P5D8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.91■□□□□ 0.78
Smchd1Q6P5D8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smchd1Q6P5D8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smchd1Q6P5D8 Gm5417-201ENSMUST00000079706 384 ntBASIC19.91■□□□□ 0.78
Smchd1Q6P5D8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smchd1Q6P5D8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Gm21814-202ENSMUST00000203277 873 ntBASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.9■□□□□ 0.78
Smchd1Q6P5D8 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.89■□□□□ 0.78
Smchd1Q6P5D8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Gm3375-201ENSMUST00000203929 796 ntBASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smchd1Q6P5D8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smchd1Q6P5D8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.87■□□□□ 0.77
Smchd1Q6P5D8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Smchd1Q6P5D8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smchd1Q6P5D8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Smchd1Q6P5D8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smchd1Q6P5D8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smchd1Q6P5D8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smchd1Q6P5D8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smchd1Q6P5D8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms