Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga7Q6DD96 Tgds-204ENSMUST00000228543 1594 ntBASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Gm6420-201ENSMUST00000193885 723 ntBASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga7Q6DD96 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga7Q6DD96 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Nespas-201ENSMUST00000143738 1083 ntBASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga7Q6DD96 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhga7Q6DD96 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga7Q6DD96 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga7Q6DD96 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga7Q6DD96 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga7Q6DD96 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhga7Q6DD96 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Pcdhga7Q6DD96 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.38
Pcdhga7Q6DD96 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Gm10033-202ENSMUST00000211874 928 ntBASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhga7Q6DD96 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms