Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Commd3Q63829 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.09■□□□□ 0.01
Commd3Q63829 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Commd3Q63829 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Commd3Q63829 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Commd3Q63829 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Commd3Q63829 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Commd3Q63829 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Commd3Q63829 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.08■□□□□ 0
Commd3Q63829 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.08■□□□□ 0
Commd3Q63829 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.07■□□□□ 0
Commd3Q63829 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.07■□□□□ 0
Commd3Q63829 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.07■□□□□ 0
Commd3Q63829 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.07■□□□□ 0
Commd3Q63829 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.07■□□□□ 0
Commd3Q63829 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.07■□□□□ 0
Commd3Q63829 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Commd3Q63829 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Commd3Q63829 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.07■□□□□ 0
Commd3Q63829 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
Commd3Q63829 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.06■□□□□ 0
Commd3Q63829 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.06■□□□□ 0
Commd3Q63829 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.06■□□□□ 0
Commd3Q63829 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.06■□□□□ 0
Commd3Q63829 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Commd3Q63829 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ 0
Commd3Q63829 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Commd3Q63829 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Commd3Q63829 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Commd3Q63829 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Commd3Q63829 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Commd3Q63829 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
Commd3Q63829 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Commd3Q63829 Gm15820-201ENSMUST00000201566 728 ntBASIC15.05■□□□□ -0
Commd3Q63829 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
Commd3Q63829 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.05■□□□□ -0
Commd3Q63829 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.05■□□□□ -0
Commd3Q63829 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Commd3Q63829 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Commd3Q63829 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.04■□□□□ -0
Commd3Q63829 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.04■□□□□ -0
Commd3Q63829 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Commd3Q63829 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Commd3Q63829 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Commd3Q63829 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Commd3Q63829 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Commd3Q63829 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms