Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six3Q62233 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six3Q62233 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six3Q62233 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six3Q62233 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.64■□□□□ 0.41
Six3Q62233 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Six3Q62233 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.64■□□□□ 0.41
Six3Q62233 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.64■□□□□ 0.41
Six3Q62233 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.64■□□□□ 0.41
Six3Q62233 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six3Q62233 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six3Q62233 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.64■□□□□ 0.41
Six3Q62233 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.63■□□□□ 0.41
Six3Q62233 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Six3Q62233 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.63■□□□□ 0.41
Six3Q62233 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.63■□□□□ 0.41
Six3Q62233 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.63■□□□□ 0.41
Six3Q62233 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Six3Q62233 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Six3Q62233 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.63■□□□□ 0.41
Six3Q62233 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Six3Q62233 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Six3Q62233 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Six3Q62233 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Six3Q62233 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Six3Q62233 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.62■□□□□ 0.41
Six3Q62233 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Six3Q62233 Gm22325-201ENSMUST00000158904 308 ntBASIC17.62■□□□□ 0.41
Six3Q62233 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 AV356131-201ENSMUST00000206201 750 ntBASIC17.62■□□□□ 0.41
Six3Q62233 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Six3Q62233 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six3Q62233 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Six3Q62233 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six3Q62233 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.61■□□□□ 0.41
Six3Q62233 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Six3Q62233 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Six3Q62233 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
Six3Q62233 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.6■□□□□ 0.41
Six3Q62233 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Six3Q62233 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.6■□□□□ 0.41
Six3Q62233 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six3Q62233 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.59■□□□□ 0.41
Six3Q62233 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.59■□□□□ 0.41
Six3Q62233 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.59■□□□□ 0.41
Six3Q62233 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Six3Q62233 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Six3Q62233 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.58■□□□□ 0.41
Six3Q62233 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six3Q62233 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six3Q62233 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six3Q62233 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six3Q62233 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Six3Q62233 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms