Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxn1Q61575 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Foxn1Q61575 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxn1Q61575 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxn1Q61575 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxn1Q61575 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxn1Q61575 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxn1Q61575 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxn1Q61575 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxn1Q61575 Gm27389-201ENSMUST00000183622 195 ntBASIC20.67■□□□□ 0.9
Foxn1Q61575 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.67■□□□□ 0.9
Foxn1Q61575 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.67■□□□□ 0.9
Foxn1Q61575 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Foxn1Q61575 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Foxn1Q61575 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.67■□□□□ 0.9
Foxn1Q61575 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Foxn1Q61575 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxn1Q61575 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.66■□□□□ 0.9
Foxn1Q61575 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Foxn1Q61575 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxn1Q61575 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxn1Q61575 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxn1Q61575 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Foxn1Q61575 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxn1Q61575 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Foxn1Q61575 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.65■□□□□ 0.9
Foxn1Q61575 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Foxn1Q61575 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxn1Q61575 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Foxn1Q61575 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxn1Q61575 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxn1Q61575 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxn1Q61575 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Foxn1Q61575 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxn1Q61575 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxn1Q61575 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.64■□□□□ 0.89
Foxn1Q61575 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.64■□□□□ 0.89
Foxn1Q61575 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Foxn1Q61575 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Foxn1Q61575 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Foxn1Q61575 Gm18115-201ENSMUST00000221209 621 ntBASIC20.64■□□□□ 0.89
Foxn1Q61575 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Foxn1Q61575 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxn1Q61575 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxn1Q61575 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxn1Q61575 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxn1Q61575 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxn1Q61575 Gm13474-201ENSMUST00000122466 815 ntBASIC20.63■□□□□ 0.89
Foxn1Q61575 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxn1Q61575 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxn1Q61575 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxn1Q61575 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Foxn1Q61575 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Foxn1Q61575 Mir3081-201ENSMUST00000175305 84 ntBASIC20.62■□□□□ 0.89
Foxn1Q61575 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.62■□□□□ 0.89
Foxn1Q61575 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxn1Q61575 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.61■□□□□ 0.89
Foxn1Q61575 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.61■□□□□ 0.89
Foxn1Q61575 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.61■□□□□ 0.89
Foxn1Q61575 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 AW822252-206ENSMUST00000208904 237 ntBASIC20.61■□□□□ 0.89
Foxn1Q61575 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxn1Q61575 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxn1Q61575 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Foxn1Q61575 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxn1Q61575 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxn1Q61575 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Foxn1Q61575 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxn1Q61575 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.6■□□□□ 0.89
Foxn1Q61575 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.6■□□□□ 0.89
Foxn1Q61575 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.6■□□□□ 0.89
Foxn1Q61575 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Foxn1Q61575 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Foxn1Q61575 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms