Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.09■□□□□ 0.17
Cfhr1Q61406 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cfhr1Q61406 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Cfhr1Q61406 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
Cfhr1Q61406 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Odf3b-204ENSMUST00000227834 930 ntBASIC16.08■□□□□ 0.16
Cfhr1Q61406 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cfhr1Q61406 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Gm13559-201ENSMUST00000120476 863 ntBASIC16.07■□□□□ 0.16
Cfhr1Q61406 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Gm18025-201ENSMUST00000221733 862 ntBASIC16.07■□□□□ 0.16
Cfhr1Q61406 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.07■□□□□ 0.16
Cfhr1Q61406 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.07■□□□□ 0.16
Cfhr1Q61406 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cfhr1Q61406 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfhr1Q61406 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.06■□□□□ 0.16
Cfhr1Q61406 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfhr1Q61406 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Gm15375-201ENSMUST00000119510 849 ntBASIC16.06■□□□□ 0.16
Cfhr1Q61406 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cfhr1Q61406 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfhr1Q61406 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.04■□□□□ 0.16
Cfhr1Q61406 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cfhr1Q61406 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms