Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hcfc1Q61191 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.23■□□□□ 0.03
Hcfc1Q61191 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hcfc1Q61191 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Gm5587-201ENSMUST00000206270 674 ntBASIC15.22■□□□□ 0.03
Hcfc1Q61191 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Gm9013-201ENSMUST00000132939 882 ntBASIC15.22■□□□□ 0.03
Hcfc1Q61191 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hcfc1Q61191 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.21■□□□□ 0.03
Hcfc1Q61191 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hcfc1Q61191 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Gm7370-201ENSMUST00000219471 767 ntBASIC15.21■□□□□ 0.02
Hcfc1Q61191 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Hcfc1Q61191 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Hcfc1Q61191 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcfc1Q61191 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Gm22697-201ENSMUST00000175194 63 ntBASIC15.2■□□□□ 0.02
Hcfc1Q61191 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Hcfc1Q61191 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.19■□□□□ 0.02
Hcfc1Q61191 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Hcfc1Q61191 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Gm14859-201ENSMUST00000117752 357 ntBASIC15.18■□□□□ 0.02
Hcfc1Q61191 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hcfc1Q61191 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hcfc1Q61191 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms