Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a4Q60857 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Slc6a4Q60857 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Mir1199-201ENSMUST00000117015 119 ntBASIC18.5■□□□□ 0.55
Slc6a4Q60857 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.5■□□□□ 0.55
Slc6a4Q60857 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.5■□□□□ 0.55
Slc6a4Q60857 Gm43183-201ENSMUST00000200632 547 ntBASIC18.5■□□□□ 0.55
Slc6a4Q60857 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slc6a4Q60857 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Mir6982-201ENSMUST00000184354 68 ntBASIC18.49■□□□□ 0.55
Slc6a4Q60857 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.49■□□□□ 0.55
Slc6a4Q60857 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slc6a4Q60857 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Gm715-201ENSMUST00000117865 831 ntBASIC18.48■□□□□ 0.55
Slc6a4Q60857 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.48■□□□□ 0.55
Slc6a4Q60857 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.48■□□□□ 0.55
Slc6a4Q60857 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Slc6a4Q60857 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.48■□□□□ 0.55
Slc6a4Q60857 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slc6a4Q60857 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Mir2861-201ENSMUST00000175539 82 ntBASIC18.47■□□□□ 0.55
Slc6a4Q60857 Gm37292-201ENSMUST00000192062 758 ntBASIC18.47■□□□□ 0.55
Slc6a4Q60857 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.47■□□□□ 0.55
Slc6a4Q60857 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Mir6349-201ENSMUST00000184059 97 ntBASIC18.46■□□□□ 0.55
Slc6a4Q60857 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc6a4Q60857 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Slc6a4Q60857 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.46■□□□□ 0.55
Slc6a4Q60857 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Slc6a4Q60857 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.45■□□□□ 0.54
Slc6a4Q60857 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.45■□□□□ 0.54
Slc6a4Q60857 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Tgds-204ENSMUST00000228543 1594 ntBASIC18.45■□□□□ 0.54
Slc6a4Q60857 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc6a4Q60857 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc6a4Q60857 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms