Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav8d-1Q5R1H8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav8d-1Q5R1H8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav8d-1Q5R1H8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav8d-1Q5R1H8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav8d-1Q5R1H8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav8d-1Q5R1H8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Trav8d-1Q5R1H8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms