Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Mir3081-201ENSMUST00000175305 84 ntBASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col27a1Q5QNQ9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col27a1Q5QNQ9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Col27a1Q5QNQ9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.58■□□□□ 0.41
Col27a1Q5QNQ9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col27a1Q5QNQ9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col27a1Q5QNQ9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Col27a1Q5QNQ9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Gm11355-201ENSMUST00000121120 306 ntBASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Gm9731-201ENSMUST00000209480 747 ntBASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col27a1Q5QNQ9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Gm7213-201ENSMUST00000215977 950 ntBASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col27a1Q5QNQ9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Mir770-201ENSMUST00000103252 94 ntBASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col27a1Q5QNQ9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Gm28659-201ENSMUST00000188013 759 ntBASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col27a1Q5QNQ9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col27a1Q5QNQ9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Gm10566-201ENSMUST00000086739 996 ntBASIC17.53■□□□□ 0.4
Col27a1Q5QNQ9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col27a1Q5QNQ9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms