Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf43Q5NCP0 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf43Q5NCP0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf43Q5NCP0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Gm12382-201ENSMUST00000122005 922 ntBASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rnf43Q5NCP0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf43Q5NCP0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Gm21362-201ENSMUST00000194272 928 ntBASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Rnf43Q5NCP0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf43Q5NCP0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf43Q5NCP0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Golph3-205ENSMUST00000228671 2842 ntBASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf43Q5NCP0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf43Q5NCP0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf43Q5NCP0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf43Q5NCP0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf43Q5NCP0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf43Q5NCP0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms