Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ckap2Q3V1H1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.78■□□□□ 0.92
Ckap2Q3V1H1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.78■□□□□ 0.92
Ckap2Q3V1H1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ckap2Q3V1H1 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.77■□□□□ 0.91
Ckap2Q3V1H1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ckap2Q3V1H1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Ckap2Q3V1H1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.75■□□□□ 0.91
Ckap2Q3V1H1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ckap2Q3V1H1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ckap2Q3V1H1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.75■□□□□ 0.91
Ckap2Q3V1H1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ckap2Q3V1H1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Gm27275-201ENSMUST00000184318 272 ntBASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ckap2Q3V1H1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ckap2Q3V1H1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Mir2861-201ENSMUST00000175539 82 ntBASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Gm37856-201ENSMUST00000191634 999 ntBASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Mtag2-201ENSMUST00000058665 714 ntBASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ckap2Q3V1H1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ckap2Q3V1H1 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.7■□□□□ 0.91
Ckap2Q3V1H1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ckap2Q3V1H1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ckap2Q3V1H1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ckap2Q3V1H1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms