Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdkl5Q3UTQ8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdkl5Q3UTQ8 Rab3c-203ENSMUST00000224180 967 ntBASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdkl5Q3UTQ8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Gm44549-201ENSMUST00000208351 577 ntBASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdkl5Q3UTQ8 Gm2399-201ENSMUST00000104944 225 ntBASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Fst-202ENSMUST00000223640 2612 ntBASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdkl5Q3UTQ8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdkl5Q3UTQ8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdkl5Q3UTQ8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdkl5Q3UTQ8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdkl5Q3UTQ8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdkl5Q3UTQ8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdkl5Q3UTQ8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.89■□□□□ 0.93
Cdkl5Q3UTQ8 Gm5408-201ENSMUST00000197998 747 ntBASIC20.89■□□□□ 0.93
Cdkl5Q3UTQ8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cdkl5Q3UTQ8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cdkl5Q3UTQ8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdkl5Q3UTQ8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Gm10602-201ENSMUST00000098239 609 ntBASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdkl5Q3UTQ8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms