Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Fam196aQ3USH1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Gm24589-201ENSMUST00000116692 94 ntBASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Fam196aQ3USH1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.14■□□□□ 0.5
Fam196aQ3USH1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Mir3081-201ENSMUST00000175305 84 ntBASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Fam196aQ3USH1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Fam196aQ3USH1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Mir2861-201ENSMUST00000175539 82 ntBASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Fam196aQ3USH1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Fam196aQ3USH1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Gm18115-201ENSMUST00000221209 621 ntBASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam196aQ3USH1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam196aQ3USH1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms