Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Naf1Q3UMQ8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Mir1199-201ENSMUST00000117015 119 ntBASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Gm10138-203ENSMUST00000206952 366 ntBASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Naf1Q3UMQ8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Naf1Q3UMQ8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Naf1Q3UMQ8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Naf1Q3UMQ8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Gm15375-201ENSMUST00000119510 849 ntBASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.31■□□□□ 0.52
Naf1Q3UMQ8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Naf1Q3UMQ8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Gm18025-201ENSMUST00000221733 862 ntBASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Naf1Q3UMQ8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Golph3-205ENSMUST00000228671 2842 ntBASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Naf1Q3UMQ8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms