Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Gm6736-201ENSMUST00000166583 948 ntBASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Spg11Q3UHA3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Spg11Q3UHA3 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Gm7638-201ENSMUST00000121348 967 ntBASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Spg11Q3UHA3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Gm5264-201ENSMUST00000190584 848 ntBASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.7■□□□□ 0.26
Spg11Q3UHA3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Mir2861-201ENSMUST00000175539 82 ntBASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Spg11Q3UHA3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.69■□□□□ 0.26
Spg11Q3UHA3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Spg11Q3UHA3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms