Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Col5a2Q3U962 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Col5a2Q3U962 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col5a2Q3U962 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col5a2Q3U962 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.56■■□□□ 1.04
Col5a2Q3U962 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col5a2Q3U962 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.56■■□□□ 1.04
Col5a2Q3U962 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col5a2Q3U962 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col5a2Q3U962 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.55■■□□□ 1.04
Col5a2Q3U962 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.55■■□□□ 1.04
Col5a2Q3U962 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col5a2Q3U962 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.54■■□□□ 1.04
Col5a2Q3U962 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Mir1668-201ENSMUST00000184114 107 ntBASIC21.54■■□□□ 1.04
Col5a2Q3U962 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col5a2Q3U962 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col5a2Q3U962 Gm21559-201ENSMUST00000220638 855 ntBASIC21.53■■□□□ 1.04
Col5a2Q3U962 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col5a2Q3U962 Gm8587-201ENSMUST00000076538 843 ntBASIC21.53■■□□□ 1.04
Col5a2Q3U962 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col5a2Q3U962 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Col5a2Q3U962 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col5a2Q3U962 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.52■■□□□ 1.04
Col5a2Q3U962 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Col5a2Q3U962 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Col5a2Q3U962 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Col5a2Q3U962 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.52■■□□□ 1.04
Col5a2Q3U962 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Col5a2Q3U962 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.52■■□□□ 1.03
Col5a2Q3U962 Gm4974-201ENSMUST00000209974 875 ntBASIC21.52■■□□□ 1.03
Col5a2Q3U962 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.52■■□□□ 1.03
Col5a2Q3U962 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.52■■□□□ 1.03
Col5a2Q3U962 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a2Q3U962 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col5a2Q3U962 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Col5a2Q3U962 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Col5a2Q3U962 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.5■■□□□ 1.03
Col5a2Q3U962 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Col5a2Q3U962 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Gm13474-201ENSMUST00000122466 815 ntBASIC21.49■■□□□ 1.03
Col5a2Q3U962 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Gm17808-201ENSMUST00000200859 894 ntBASIC21.49■■□□□ 1.03
Col5a2Q3U962 Gm7791-201ENSMUST00000219066 539 ntBASIC21.49■■□□□ 1.03
Col5a2Q3U962 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Col5a2Q3U962 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.48■■□□□ 1.03
Col5a2Q3U962 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.48■■□□□ 1.03
Col5a2Q3U962 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col5a2Q3U962 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col5a2Q3U962 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Col5a2Q3U962 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Col5a2Q3U962 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms