Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.98■□□□□ 0.63
Cul4aQ3TCH7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Nespas-201ENSMUST00000143738 1083 ntBASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cul4aQ3TCH7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cul4aQ3TCH7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cul4aQ3TCH7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cul4aQ3TCH7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cul4aQ3TCH7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cul4aQ3TCH7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cul4aQ3TCH7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cul4aQ3TCH7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.94■□□□□ 0.62
Cul4aQ3TCH7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Gm42778-201ENSMUST00000199644 553 ntBASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cul4aQ3TCH7 Idnk-204ENSMUST00000226010 1898 ntBASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cul4aQ3TCH7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Cul4aQ3TCH7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms