Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim72Q1XH17 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.28■□□□□ 0.68
Trim72Q1XH17 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.27■□□□□ 0.68
Trim72Q1XH17 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim72Q1XH17 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim72Q1XH17 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim72Q1XH17 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.26■□□□□ 0.67
Trim72Q1XH17 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim72Q1XH17 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.25■□□□□ 0.67
Trim72Q1XH17 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Flg-201ENSMUST00000050758 1488 ntBASIC19.25■□□□□ 0.67
Trim72Q1XH17 Gm38285-201ENSMUST00000192928 922 ntBASIC19.25■□□□□ 0.67
Trim72Q1XH17 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim72Q1XH17 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.24■□□□□ 0.67
Trim72Q1XH17 Grk6-206ENSMUST00000224995 2971 ntBASIC19.24■□□□□ 0.67
Trim72Q1XH17 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim72Q1XH17 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Fst-202ENSMUST00000223640 2612 ntBASIC19.23■□□□□ 0.67
Trim72Q1XH17 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim72Q1XH17 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim72Q1XH17 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Zfp783-201ENSMUST00000095946 670 ntBASIC19.22■□□□□ 0.67
Trim72Q1XH17 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.22■□□□□ 0.67
Trim72Q1XH17 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim72Q1XH17 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim72Q1XH17 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms