Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Gm27357-201ENSMUST00000183754 135 ntBASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col19a1Q0VF58 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.35■□□□□ 0.69
Col19a1Q0VF58 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Gm11950-201ENSMUST00000121615 838 ntBASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Mir1668-201ENSMUST00000184114 107 ntBASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Gm4974-201ENSMUST00000209974 875 ntBASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col19a1Q0VF58 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col19a1Q0VF58 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Col19a1Q0VF58 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col19a1Q0VF58 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Gm7638-201ENSMUST00000121348 967 ntBASIC19.33■□□□□ 0.68
Col19a1Q0VF58 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Col19a1Q0VF58 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Col19a1Q0VF58 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Gm7213-201ENSMUST00000215977 950 ntBASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col19a1Q0VF58 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Gm5864-201ENSMUST00000202263 970 ntBASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Col19a1Q0VF58 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Col19a1Q0VF58 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms