Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Emx1Q04742 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Emx1Q04742 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.82■□□□□ 0.28
Emx1Q04742 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.82■□□□□ 0.28
Emx1Q04742 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.82■□□□□ 0.28
Emx1Q04742 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Emx1Q04742 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Emx1Q04742 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.81■□□□□ 0.28
Emx1Q04742 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Emx1Q04742 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Emx1Q04742 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Emx1Q04742 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Emx1Q04742 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Emx1Q04742 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.8■□□□□ 0.28
Emx1Q04742 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Emx1Q04742 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Emx1Q04742 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Emx1Q04742 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Emx1Q04742 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
Emx1Q04742 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Emx1Q04742 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Emx1Q04742 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.79■□□□□ 0.28
Emx1Q04742 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.79■□□□□ 0.28
Emx1Q04742 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Gm9988-201ENSMUST00000069786 435 ntBASIC16.79■□□□□ 0.28
Emx1Q04742 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Emx1Q04742 Gm10602-201ENSMUST00000098239 609 ntBASIC16.79■□□□□ 0.28
Emx1Q04742 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Emx1Q04742 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.78■□□□□ 0.28
Emx1Q04742 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Emx1Q04742 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.78■□□□□ 0.28
Emx1Q04742 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Emx1Q04742 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.78■□□□□ 0.28
Emx1Q04742 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.78■□□□□ 0.28
Emx1Q04742 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Emx1Q04742 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Emx1Q04742 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Emx1Q04742 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Emx1Q04742 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Emx1Q04742 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Emx1Q04742 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Emx1Q04742 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.77■□□□□ 0.28
Emx1Q04742 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Emx1Q04742 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Emx1Q04742 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Emx1Q04742 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Emx1Q04742 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Emx1Q04742 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Emx1Q04742 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms