Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps45P97390 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps45P97390 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps45P97390 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps45P97390 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps45P97390 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps45P97390 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.65■□□□□ 0.58
Vps45P97390 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps45P97390 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps45P97390 Gm5643-201ENSMUST00000117081 966 ntBASIC18.65■□□□□ 0.58
Vps45P97390 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps45P97390 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps45P97390 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps45P97390 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps45P97390 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vps45P97390 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps45P97390 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps45P97390 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vps45P97390 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vps45P97390 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps45P97390 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps45P97390 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Vps45P97390 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps45P97390 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps45P97390 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps45P97390 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps45P97390 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps45P97390 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps45P97390 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.62■□□□□ 0.57
Vps45P97390 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vps45P97390 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps45P97390 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vps45P97390 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.62■□□□□ 0.57
Vps45P97390 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps45P97390 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps45P97390 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps45P97390 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps45P97390 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Vps45P97390 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps45P97390 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps45P97390 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps45P97390 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.61■□□□□ 0.57
Vps45P97390 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Vps45P97390 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.61■□□□□ 0.57
Vps45P97390 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps45P97390 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Vps45P97390 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.61■□□□□ 0.57
Vps45P97390 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps45P97390 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Vps45P97390 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.6■□□□□ 0.57
Vps45P97390 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Vps45P97390 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Vps45P97390 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Vps45P97390 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps45P97390 Fst-202ENSMUST00000223640 2612 ntBASIC18.59■□□□□ 0.57
Vps45P97390 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Vps45P97390 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Vps45P97390 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps45P97390 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps45P97390 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.59■□□□□ 0.57
Vps45P97390 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.59■□□□□ 0.57
Vps45P97390 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.59■□□□□ 0.57
Vps45P97390 Gm2559-201ENSMUST00000201323 363 ntBASIC18.59■□□□□ 0.57
Vps45P97390 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps45P97390 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.59■□□□□ 0.57
Vps45P97390 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Vps45P97390 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms