Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43cP86449 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43cP86449 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43cP86449 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43cP86449 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim43cP86449 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim43cP86449 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.67■□□□□ 0.74
Trim43cP86449 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim43cP86449 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim43cP86449 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim43cP86449 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Trim43cP86449 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim43cP86449 Dio3-201ENSMUST00000097228 1449 ntBASIC19.67■□□□□ 0.74
Trim43cP86449 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim43cP86449 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim43cP86449 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim43cP86449 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.66■□□□□ 0.74
Trim43cP86449 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.66■□□□□ 0.74
Trim43cP86449 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trim43cP86449 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Trim43cP86449 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim43cP86449 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim43cP86449 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim43cP86449 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43cP86449 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43cP86449 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.65■□□□□ 0.74
Trim43cP86449 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim43cP86449 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43cP86449 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim43cP86449 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.65■□□□□ 0.74
Trim43cP86449 Gm5408-201ENSMUST00000197998 747 ntBASIC19.65■□□□□ 0.74
Trim43cP86449 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim43cP86449 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43cP86449 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim43cP86449 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trim43cP86449 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim43cP86449 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim43cP86449 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Trim43cP86449 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43cP86449 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43cP86449 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim43cP86449 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.64■□□□□ 0.73
Trim43cP86449 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.64■□□□□ 0.73
Trim43cP86449 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.64■□□□□ 0.73
Trim43cP86449 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim43cP86449 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim43cP86449 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim43cP86449 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Gm11927-201ENSMUST00000118472 759 ntBASIC19.63■□□□□ 0.73
Trim43cP86449 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.63■□□□□ 0.73
Trim43cP86449 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim43cP86449 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.63■□□□□ 0.73
Trim43cP86449 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim43cP86449 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Trim43cP86449 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim43cP86449 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim43cP86449 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim43cP86449 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43cP86449 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim43cP86449 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43cP86449 Rarb-207ENSMUST00000225921 2756 ntBASIC19.62■□□□□ 0.73
Trim43cP86449 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim43cP86449 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim43cP86449 Gm12527-201ENSMUST00000117967 564 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms