Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Traf6P70196 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Traf6P70196 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.77■□□□□ 0.43
Traf6P70196 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Traf6P70196 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Traf6P70196 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.76■□□□□ 0.43
Traf6P70196 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.76■□□□□ 0.43
Traf6P70196 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.76■□□□□ 0.43
Traf6P70196 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Traf6P70196 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.76■□□□□ 0.43
Traf6P70196 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.76■□□□□ 0.43
Traf6P70196 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.76■□□□□ 0.43
Traf6P70196 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.76■□□□□ 0.43
Traf6P70196 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Traf6P70196 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.76■□□□□ 0.43
Traf6P70196 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.76■□□□□ 0.43
Traf6P70196 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Traf6P70196 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.75■□□□□ 0.43
Traf6P70196 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.75■□□□□ 0.43
Traf6P70196 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.75■□□□□ 0.43
Traf6P70196 Nespas-201ENSMUST00000143738 1083 ntBASIC17.75■□□□□ 0.43
Traf6P70196 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.75■□□□□ 0.43
Traf6P70196 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Traf6P70196 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Traf6P70196 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Traf6P70196 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.75■□□□□ 0.43
Traf6P70196 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.74■□□□□ 0.43
Traf6P70196 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.74■□□□□ 0.43
Traf6P70196 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.74■□□□□ 0.43
Traf6P70196 Gm6420-201ENSMUST00000193885 723 ntBASIC17.74■□□□□ 0.43
Traf6P70196 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Traf6P70196 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Traf6P70196 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Traf6P70196 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf6P70196 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Traf6P70196 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.73■□□□□ 0.43
Traf6P70196 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf6P70196 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf6P70196 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Traf6P70196 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.72■□□□□ 0.43
Traf6P70196 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Traf6P70196 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Traf6P70196 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Gm42642-201ENSMUST00000200683 355 ntBASIC17.72■□□□□ 0.43
Traf6P70196 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Gm10033-202ENSMUST00000211874 928 ntBASIC17.72■□□□□ 0.43
Traf6P70196 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Traf6P70196 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.72■□□□□ 0.43
Traf6P70196 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Traf6P70196 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Traf6P70196 Tgds-204ENSMUST00000228543 1594 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms