Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lhx1P63006 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx1P63006 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx1P63006 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx1P63006 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Lhx1P63006 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.75■□□□□ 0.43
Lhx1P63006 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.75■□□□□ 0.43
Lhx1P63006 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.75■□□□□ 0.43
Lhx1P63006 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx1P63006 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lhx1P63006 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lhx1P63006 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Lhx1P63006 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lhx1P63006 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lhx1P63006 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.74■□□□□ 0.43
Lhx1P63006 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lhx1P63006 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx1P63006 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx1P63006 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx1P63006 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx1P63006 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx1P63006 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.73■□□□□ 0.43
Lhx1P63006 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Lhx1P63006 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx1P63006 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lhx1P63006 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.73■□□□□ 0.43
Lhx1P63006 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Lhx1P63006 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lhx1P63006 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.72■□□□□ 0.43
Lhx1P63006 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.72■□□□□ 0.43
Lhx1P63006 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.72■□□□□ 0.43
Lhx1P63006 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.72■□□□□ 0.43
Lhx1P63006 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lhx1P63006 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx1P63006 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx1P63006 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx1P63006 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.71■□□□□ 0.43
Lhx1P63006 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.71■□□□□ 0.43
Lhx1P63006 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx1P63006 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx1P63006 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx1P63006 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.71■□□□□ 0.43
Lhx1P63006 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lhx1P63006 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lhx1P63006 Golph3-205ENSMUST00000228671 2842 ntBASIC17.71■□□□□ 0.42
Lhx1P63006 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Lhx1P63006 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Lhx1P63006 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.7■□□□□ 0.42
Lhx1P63006 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx1P63006 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lhx1P63006 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.7■□□□□ 0.42
Lhx1P63006 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.7■□□□□ 0.42
Lhx1P63006 Gm6576-201ENSMUST00000169678 883 ntBASIC17.7■□□□□ 0.42
Lhx1P63006 Gm18025-201ENSMUST00000221733 862 ntBASIC17.7■□□□□ 0.42
Lhx1P63006 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx1P63006 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lhx1P63006 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx1P63006 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx1P63006 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx1P63006 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lhx1P63006 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lhx1P63006 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lhx1P63006 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms