Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm2P58774 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm2P58774 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm2P58774 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tpm2P58774 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm2P58774 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.72■□□□□ 0.91
Tpm2P58774 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm2P58774 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tpm2P58774 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
Tpm2P58774 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Tpm2P58774 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Tpm2P58774 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tpm2P58774 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tpm2P58774 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tpm2P58774 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tpm2P58774 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.7■□□□□ 0.9
Tpm2P58774 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Tpm2P58774 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.7■□□□□ 0.9
Tpm2P58774 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tpm2P58774 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tpm2P58774 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm2P58774 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tpm2P58774 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm2P58774 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm2P58774 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Gm12251-201ENSMUST00000117893 792 ntBASIC20.69■□□□□ 0.9
Tpm2P58774 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm2P58774 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Tpm2P58774 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tpm2P58774 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tpm2P58774 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tpm2P58774 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tpm2P58774 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.68■□□□□ 0.9
Tpm2P58774 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tpm2P58774 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tpm2P58774 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tpm2P58774 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.67■□□□□ 0.9
Tpm2P58774 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tpm2P58774 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tpm2P58774 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.67■□□□□ 0.9
Tpm2P58774 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tpm2P58774 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.67■□□□□ 0.9
Tpm2P58774 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.66■□□□□ 0.9
Tpm2P58774 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Tpm2P58774 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Tpm2P58774 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Mir7075-201ENSMUST00000184187 82 ntBASIC20.66■□□□□ 0.9
Tpm2P58774 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.66■□□□□ 0.9
Tpm2P58774 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Tpm2P58774 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tpm2P58774 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms