Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.19□□□□□ -0.14
Ctdsp1P58466 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ctdsp1P58466 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdsp1P58466 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctdsp1P58466 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Gm10399-202ENSMUST00000202768 748 ntBASIC14.18□□□□□ -0.14
Ctdsp1P58466 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdsp1P58466 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.17□□□□□ -0.14
Ctdsp1P58466 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.17□□□□□ -0.14
Ctdsp1P58466 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctdsp1P58466 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctdsp1P58466 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctdsp1P58466 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctdsp1P58466 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctdsp1P58466 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms