Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Irf5P56477 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Irf5P56477 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.35■■□□□ 1.01
Irf5P56477 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Irf5P56477 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC21.35■■□□□ 1.01
Irf5P56477 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Irf5P56477 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.35■■□□□ 1.01
Irf5P56477 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Irf5P56477 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Irf5P56477 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Irf5P56477 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Irf5P56477 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Irf5P56477 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Irf5P56477 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Irf5P56477 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Irf5P56477 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Irf5P56477 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Irf5P56477 Gm13158-201ENSMUST00000122007 736 ntBASIC21.33■■□□□ 1.01
Irf5P56477 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Irf5P56477 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.33■■□□□ 1.01
Irf5P56477 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Irf5P56477 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Irf5P56477 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Irf5P56477 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Irf5P56477 AC154231.1-201ENSMUST00000220564 2175 ntBASIC21.33■■□□□ 1
Irf5P56477 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Irf5P56477 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Irf5P56477 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.33■■□□□ 1
Irf5P56477 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Irf5P56477 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.32■■□□□ 1
Irf5P56477 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.32■■□□□ 1
Irf5P56477 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Irf5P56477 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.32■■□□□ 1
Irf5P56477 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.32■■□□□ 1
Irf5P56477 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.32■■□□□ 1
Irf5P56477 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.32■■□□□ 1
Irf5P56477 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Irf5P56477 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Irf5P56477 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Irf5P56477 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Gm2399-201ENSMUST00000104944 225 ntBASIC21.31■■□□□ 1
Irf5P56477 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.31■■□□□ 1
Irf5P56477 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.31■■□□□ 1
Irf5P56477 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.31■■□□□ 1
Irf5P56477 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.31■■□□□ 1
Irf5P56477 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.31■■□□□ 1
Irf5P56477 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.31■■□□□ 1
Irf5P56477 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.31■■□□□ 1
Irf5P56477 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.31■■□□□ 1
Irf5P56477 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.31■■□□□ 1
Irf5P56477 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.31■■□□□ 1
Irf5P56477 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.31■■□□□ 1
Irf5P56477 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Irf5P56477 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.3■■□□□ 1
Irf5P56477 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.3■■□□□ 1
Irf5P56477 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 Gm9987-201ENSMUST00000069768 567 ntBASIC21.3■■□□□ 1
Irf5P56477 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Irf5P56477 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Irf5P56477 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.29■■□□□ 1
Irf5P56477 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Irf5P56477 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Irf5P56477 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.29■■□□□ 1
Irf5P56477 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Irf5P56477 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Irf5P56477 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.29■■□□□ 1
Irf5P56477 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.29■■□□□ 1
Irf5P56477 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.29■■□□□ 1
Irf5P56477 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.29■■□□□ 1
Irf5P56477 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Irf5P56477 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.29■■□□□ 1
Irf5P56477 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Irf5P56477 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Irf5P56477 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.29■■□□□ 1
Irf5P56477 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Irf5P56477 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Irf5P56477 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.29■■□□□ 1
Irf5P56477 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms