Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Cdh11P55288 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.45■□□□□ 0.22
Cdh11P55288 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
Cdh11P55288 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cdh11P55288 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.44■□□□□ 0.22
Cdh11P55288 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Gm12933-201ENSMUST00000120203 872 ntBASIC16.44■□□□□ 0.22
Cdh11P55288 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cdh11P55288 Gm38205-201ENSMUST00000192243 258 ntBASIC16.44■□□□□ 0.22
Cdh11P55288 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cdh11P55288 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cdh11P55288 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.43■□□□□ 0.22
Cdh11P55288 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.43■□□□□ 0.22
Cdh11P55288 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Cdh11P55288 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdh11P55288 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdh11P55288 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.42■□□□□ 0.22
Cdh11P55288 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cdh11P55288 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Cdh11P55288 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.42■□□□□ 0.22
Cdh11P55288 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.42■□□□□ 0.22
Cdh11P55288 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cdh11P55288 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cdh11P55288 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cdh11P55288 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdh11P55288 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cdh11P55288 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.41■□□□□ 0.22
Cdh11P55288 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.41■□□□□ 0.22
Cdh11P55288 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cdh11P55288 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdh11P55288 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cdh11P55288 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cdh11P55288 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Cdh11P55288 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.4■□□□□ 0.22
Cdh11P55288 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cdh11P55288 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms