Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NrlP54846 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
NrlP54846 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.25■□□□□ 0.67
NrlP54846 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NrlP54846 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NrlP54846 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.24■□□□□ 0.67
NrlP54846 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.24■□□□□ 0.67
NrlP54846 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NrlP54846 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NrlP54846 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.23■□□□□ 0.67
NrlP54846 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 Gm10231-201ENSMUST00000181584 441 ntBASIC19.23■□□□□ 0.67
NrlP54846 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 Gm10175-202ENSMUST00000208752 441 ntBASIC19.23■□□□□ 0.67
NrlP54846 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NrlP54846 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
NrlP54846 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NrlP54846 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NrlP54846 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NrlP54846 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NrlP54846 Gm15375-201ENSMUST00000119510 849 ntBASIC19.22■□□□□ 0.67
NrlP54846 Gm21814-202ENSMUST00000203277 873 ntBASIC19.22■□□□□ 0.67
NrlP54846 Gm18025-201ENSMUST00000221733 862 ntBASIC19.22■□□□□ 0.67
NrlP54846 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NrlP54846 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NrlP54846 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NrlP54846 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NrlP54846 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NrlP54846 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NrlP54846 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NrlP54846 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 BC021767-201ENSMUST00000126387 1716 ntBASIC19.21■□□□□ 0.67
NrlP54846 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NrlP54846 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.21■□□□□ 0.67
NrlP54846 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.21■□□□□ 0.67
NrlP54846 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NrlP54846 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NrlP54846 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NrlP54846 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.2■□□□□ 0.66
NrlP54846 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NrlP54846 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NrlP54846 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NrlP54846 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NrlP54846 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NrlP54846 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.19■□□□□ 0.66
NrlP54846 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.19■□□□□ 0.66
NrlP54846 Gm38285-201ENSMUST00000192928 922 ntBASIC19.19■□□□□ 0.66
NrlP54846 Gm42545-201ENSMUST00000202755 922 ntBASIC19.19■□□□□ 0.66
NrlP54846 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.19■□□□□ 0.66
NrlP54846 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.19■□□□□ 0.66
NrlP54846 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.19■□□□□ 0.66
NrlP54846 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NrlP54846 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.19■□□□□ 0.66
NrlP54846 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NrlP54846 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NrlP54846 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms