Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ddx6P54823 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx6P54823 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx6P54823 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx6P54823 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx6P54823 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ddx6P54823 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx6P54823 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx6P54823 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx6P54823 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx6P54823 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx6P54823 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ddx6P54823 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.39■□□□□ 0.53
Ddx6P54823 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx6P54823 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ddx6P54823 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx6P54823 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.39■□□□□ 0.53
Ddx6P54823 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx6P54823 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.39■□□□□ 0.53
Ddx6P54823 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx6P54823 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ddx6P54823 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx6P54823 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx6P54823 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx6P54823 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ddx6P54823 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ddx6P54823 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx6P54823 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx6P54823 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx6P54823 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.37■□□□□ 0.53
Ddx6P54823 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.37■□□□□ 0.53
Ddx6P54823 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ddx6P54823 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
Ddx6P54823 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ddx6P54823 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx6P54823 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.36■□□□□ 0.53
Ddx6P54823 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx6P54823 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ddx6P54823 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.36■□□□□ 0.53
Ddx6P54823 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx6P54823 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx6P54823 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ddx6P54823 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ddx6P54823 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ddx6P54823 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.35■□□□□ 0.53
Ddx6P54823 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.35■□□□□ 0.53
Ddx6P54823 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.35■□□□□ 0.53
Ddx6P54823 Gm10231-201ENSMUST00000181584 441 ntBASIC18.35■□□□□ 0.53
Ddx6P54823 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Gm10175-202ENSMUST00000208752 441 ntBASIC18.35■□□□□ 0.53
Ddx6P54823 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Ddx6P54823 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ddx6P54823 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms