Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nub1P54729 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nub1P54729 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.41■□□□□ 0.7
Nub1P54729 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.41■□□□□ 0.7
Nub1P54729 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Nub1P54729 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nub1P54729 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Nub1P54729 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Nub1P54729 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.4■□□□□ 0.7
Nub1P54729 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Nub1P54729 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nub1P54729 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nub1P54729 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nub1P54729 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.39■□□□□ 0.7
Nub1P54729 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nub1P54729 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nub1P54729 Gm12441-201ENSMUST00000121806 588 ntBASIC19.39■□□□□ 0.69
Nub1P54729 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.39■□□□□ 0.69
Nub1P54729 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.39■□□□□ 0.69
Nub1P54729 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.39■□□□□ 0.69
Nub1P54729 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Nub1P54729 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nub1P54729 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nub1P54729 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.39■□□□□ 0.69
Nub1P54729 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nub1P54729 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.39■□□□□ 0.69
Nub1P54729 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nub1P54729 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nub1P54729 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Nub1P54729 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nub1P54729 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nub1P54729 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nub1P54729 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.38■□□□□ 0.69
Nub1P54729 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nub1P54729 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nub1P54729 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Nub1P54729 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nub1P54729 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nub1P54729 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nub1P54729 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nub1P54729 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Nub1P54729 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nub1P54729 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Nub1P54729 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.36■□□□□ 0.69
Nub1P54729 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.36■□□□□ 0.69
Nub1P54729 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.36■□□□□ 0.69
Nub1P54729 Gm2399-201ENSMUST00000104944 225 ntBASIC19.36■□□□□ 0.69
Nub1P54729 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Nub1P54729 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.36■□□□□ 0.69
Nub1P54729 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.36■□□□□ 0.69
Nub1P54729 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nub1P54729 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nub1P54729 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.35■□□□□ 0.69
Nub1P54729 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.35■□□□□ 0.69
Nub1P54729 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nub1P54729 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms