Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox1P53783 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sox1P53783 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.48■□□□□ 0.55
Sox1P53783 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Gm11950-201ENSMUST00000121615 838 ntBASIC18.48■□□□□ 0.55
Sox1P53783 Gm27742-201ENSMUST00000184667 60 ntBASIC18.48■□□□□ 0.55
Sox1P53783 Gm18206-201ENSMUST00000207027 926 ntBASIC18.48■□□□□ 0.55
Sox1P53783 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.48■□□□□ 0.55
Sox1P53783 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox1P53783 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox1P53783 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox1P53783 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox1P53783 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox1P53783 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox1P53783 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox1P53783 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.47■□□□□ 0.55
Sox1P53783 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Gm18733-201ENSMUST00000173950 856 ntBASIC18.46■□□□□ 0.55
Sox1P53783 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sox1P53783 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Sox1P53783 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Sox1P53783 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sox1P53783 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sox1P53783 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Sox1P53783 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.45■□□□□ 0.54
Sox1P53783 Gm7370-201ENSMUST00000219471 767 ntBASIC18.45■□□□□ 0.54
Sox1P53783 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox1P53783 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.44■□□□□ 0.54
Sox1P53783 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sox1P53783 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sox1P53783 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox1P53783 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox1P53783 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.43■□□□□ 0.54
Sox1P53783 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.43■□□□□ 0.54
Sox1P53783 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox1P53783 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox1P53783 Gm13474-201ENSMUST00000122466 815 ntBASIC18.43■□□□□ 0.54
Sox1P53783 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox1P53783 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox1P53783 Gm27459-201ENSMUST00000184860 107 ntBASIC18.43■□□□□ 0.54
Sox1P53783 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.43■□□□□ 0.54
Sox1P53783 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox1P53783 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.43■□□□□ 0.54
Sox1P53783 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox1P53783 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sox1P53783 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sox1P53783 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sox1P53783 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox1P53783 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms