Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.49■□□□□ 0.39
Lbx1P52955 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.49■□□□□ 0.39
Lbx1P52955 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lbx1P52955 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Lbx1P52955 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Gm6736-201ENSMUST00000166583 948 ntBASIC17.48■□□□□ 0.39
Lbx1P52955 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.48■□□□□ 0.39
Lbx1P52955 Gm43575-201ENSMUST00000196420 516 ntBASIC17.48■□□□□ 0.39
Lbx1P52955 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Lbx1P52955 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lbx1P52955 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lbx1P52955 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.47■□□□□ 0.39
Lbx1P52955 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.47■□□□□ 0.39
Lbx1P52955 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lbx1P52955 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.47■□□□□ 0.39
Lbx1P52955 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Lbx1P52955 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lbx1P52955 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lbx1P52955 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lbx1P52955 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lbx1P52955 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lbx1P52955 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.46■□□□□ 0.38
Lbx1P52955 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lbx1P52955 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lbx1P52955 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lbx1P52955 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.45■□□□□ 0.38
Lbx1P52955 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.45■□□□□ 0.38
Lbx1P52955 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lbx1P52955 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lbx1P52955 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Lbx1P52955 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lbx1P52955 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lbx1P52955 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lbx1P52955 Auts2-212ENSMUST00000178555 309 ntBASIC17.44■□□□□ 0.38
Lbx1P52955 Mir6349-201ENSMUST00000184059 97 ntBASIC17.44■□□□□ 0.38
Lbx1P52955 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.44■□□□□ 0.38
Lbx1P52955 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lbx1P52955 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Lbx1P52955 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lbx1P52955 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lbx1P52955 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lbx1P52955 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lbx1P52955 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.43■□□□□ 0.38
Lbx1P52955 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.43■□□□□ 0.38
Lbx1P52955 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lbx1P52955 Gm5264-201ENSMUST00000190584 848 ntBASIC17.43■□□□□ 0.38
Lbx1P52955 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.43■□□□□ 0.38
Lbx1P52955 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms