Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdx1P52946 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.87■□□□□ 0.45
Pdx1P52946 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.87■□□□□ 0.45
Pdx1P52946 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdx1P52946 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pdx1P52946 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Pdx1P52946 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.87■□□□□ 0.45
Pdx1P52946 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pdx1P52946 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pdx1P52946 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdx1P52946 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdx1P52946 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdx1P52946 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.86■□□□□ 0.45
Pdx1P52946 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Pdx1P52946 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pdx1P52946 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.86■□□□□ 0.45
Pdx1P52946 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.86■□□□□ 0.45
Pdx1P52946 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pdx1P52946 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdx1P52946 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pdx1P52946 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.85■□□□□ 0.45
Pdx1P52946 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.85■□□□□ 0.45
Pdx1P52946 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.85■□□□□ 0.45
Pdx1P52946 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Pdx1P52946 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdx1P52946 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Gm12896-201ENSMUST00000118430 226 ntBASIC17.84■□□□□ 0.45
Pdx1P52946 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.84■□□□□ 0.45
Pdx1P52946 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pdx1P52946 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdx1P52946 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pdx1P52946 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
Pdx1P52946 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdx1P52946 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdx1P52946 Gm12527-201ENSMUST00000117967 564 ntBASIC17.83■□□□□ 0.44
Pdx1P52946 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.83■□□□□ 0.44
Pdx1P52946 Gm2559-201ENSMUST00000201323 363 ntBASIC17.83■□□□□ 0.44
Pdx1P52946 Gm20049-201ENSMUST00000219950 730 ntBASIC17.83■□□□□ 0.44
Pdx1P52946 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdx1P52946 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.83■□□□□ 0.44
Pdx1P52946 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdx1P52946 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Pdx1P52946 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdx1P52946 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdx1P52946 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdx1P52946 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Dio3-201ENSMUST00000097228 1449 ntBASIC17.82■□□□□ 0.44
Pdx1P52946 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.82■□□□□ 0.44
Pdx1P52946 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdx1P52946 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdx1P52946 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Grk6-206ENSMUST00000224995 2971 ntBASIC17.82■□□□□ 0.44
Pdx1P52946 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdx1P52946 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pdx1P52946 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdx1P52946 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms