Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Brca1P48754 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Brca1P48754 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Brca1P48754 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Brca1P48754 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca1P48754 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca1P48754 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca1P48754 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Brca1P48754 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.45■□□□□ 0.86
Brca1P48754 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca1P48754 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Brca1P48754 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Brca1P48754 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Brca1P48754 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Brca1P48754 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.44■□□□□ 0.86
Brca1P48754 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Brca1P48754 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.44■□□□□ 0.86
Brca1P48754 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Brca1P48754 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Brca1P48754 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.43■□□□□ 0.86
Brca1P48754 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.43■□□□□ 0.86
Brca1P48754 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Brca1P48754 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Brca1P48754 Gm16061-201ENSMUST00000122167 857 ntBASIC20.43■□□□□ 0.86
Brca1P48754 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Brca1P48754 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Brca1P48754 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca1P48754 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca1P48754 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Brca1P48754 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
Brca1P48754 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Brca1P48754 Gm5587-201ENSMUST00000206270 674 ntBASIC20.42■□□□□ 0.86
Brca1P48754 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.42■□□□□ 0.86
Brca1P48754 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca1P48754 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca1P48754 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca1P48754 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Brca1P48754 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.42■□□□□ 0.86
Brca1P48754 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC20.41■□□□□ 0.86
Brca1P48754 Gm4974-201ENSMUST00000209974 875 ntBASIC20.41■□□□□ 0.86
Brca1P48754 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brca1P48754 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brca1P48754 Gm25016-201ENSMUST00000158399 131 ntBASIC20.41■□□□□ 0.86
Brca1P48754 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Brca1P48754 Gm18669-201ENSMUST00000216049 778 ntBASIC20.41■□□□□ 0.86
Brca1P48754 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brca1P48754 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Brca1P48754 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.41■□□□□ 0.86
Brca1P48754 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.4■□□□□ 0.86
Brca1P48754 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Brca1P48754 Gm27704-201ENSMUST00000185094 107 ntBASIC20.4■□□□□ 0.86
Brca1P48754 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Brca1P48754 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Brca1P48754 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brca1P48754 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Brca1P48754 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.39■□□□□ 0.86
Brca1P48754 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.39■□□□□ 0.86
Brca1P48754 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Brca1P48754 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brca1P48754 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Brca1P48754 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Brca1P48754 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Brca1P48754 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brca1P48754 Gm9013-201ENSMUST00000132939 882 ntBASIC20.39■□□□□ 0.85
Brca1P48754 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Brca1P48754 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Brca1P48754 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.38■□□□□ 0.85
Brca1P48754 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Brca1P48754 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Brca1P48754 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Brca1P48754 Gm13401-201ENSMUST00000117074 291 ntBASIC20.38■□□□□ 0.85
Brca1P48754 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms