Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LmnaP48678 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LmnaP48678 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LmnaP48678 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.65■□□□□ 0.58
LmnaP48678 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LmnaP48678 Gm10231-201ENSMUST00000181584 441 ntBASIC18.65■□□□□ 0.58
LmnaP48678 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Gm43799-201ENSMUST00000201845 579 ntBASIC18.65■□□□□ 0.58
LmnaP48678 Gm10175-202ENSMUST00000208752 441 ntBASIC18.65■□□□□ 0.58
LmnaP48678 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.65■□□□□ 0.58
LmnaP48678 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LmnaP48678 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.65■□□□□ 0.58
LmnaP48678 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LmnaP48678 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LmnaP48678 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LmnaP48678 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
LmnaP48678 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LmnaP48678 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LmnaP48678 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
LmnaP48678 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.64■□□□□ 0.57
LmnaP48678 Gm11249-201ENSMUST00000117071 859 ntBASIC18.64■□□□□ 0.57
LmnaP48678 Gm6433-201ENSMUST00000118634 875 ntBASIC18.64■□□□□ 0.57
LmnaP48678 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LmnaP48678 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LmnaP48678 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LmnaP48678 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LmnaP48678 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.64■□□□□ 0.57
LmnaP48678 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.64■□□□□ 0.57
LmnaP48678 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LmnaP48678 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
LmnaP48678 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LmnaP48678 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.63■□□□□ 0.57
LmnaP48678 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.63■□□□□ 0.57
LmnaP48678 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LmnaP48678 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.63■□□□□ 0.57
LmnaP48678 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LmnaP48678 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LmnaP48678 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LmnaP48678 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LmnaP48678 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LmnaP48678 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.62■□□□□ 0.57
LmnaP48678 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.62■□□□□ 0.57
LmnaP48678 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
LmnaP48678 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
LmnaP48678 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.62■□□□□ 0.57
LmnaP48678 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.62■□□□□ 0.57
LmnaP48678 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
LmnaP48678 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LmnaP48678 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LmnaP48678 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LmnaP48678 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LmnaP48678 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LmnaP48678 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LmnaP48678 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms