Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Xcl1P47993 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Xcl1P47993 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Xcl1P47993 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Xcl1P47993 Haglr-201ENSMUST00000100000 2085 ntBASIC11.87□□□□□ -0.51
Xcl1P47993 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Xcl1P47993 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Xcl1P47993 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Xcl1P47993 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Xcl1P47993 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.86□□□□□ -0.51
Xcl1P47993 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.86□□□□□ -0.51
Xcl1P47993 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Xcl1P47993 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Mir6236-201ENSMUST00000184437 123 ntBASIC11.86□□□□□ -0.51
Xcl1P47993 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Xcl1P47993 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Xcl1P47993 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.85□□□□□ -0.51
Xcl1P47993 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Xcl1P47993 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Xcl1P47993 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC11.85□□□□□ -0.51
Xcl1P47993 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Xcl1P47993 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.85□□□□□ -0.51
Xcl1P47993 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Xcl1P47993 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Xcl1P47993 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Xcl1P47993 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.84□□□□□ -0.51
Xcl1P47993 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Xcl1P47993 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Xcl1P47993 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Xcl1P47993 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Xcl1P47993 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms