Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox18P43680 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox18P43680 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.29■□□□□ 0.36
Sox18P43680 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.28■□□□□ 0.36
Sox18P43680 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sox18P43680 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox18P43680 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.27■□□□□ 0.36
Sox18P43680 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.27■□□□□ 0.36
Sox18P43680 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sox18P43680 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Sox18P43680 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Sox18P43680 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Sox18P43680 Gm7284-201ENSMUST00000131667 944 ntBASIC17.26■□□□□ 0.35
Sox18P43680 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox18P43680 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.26■□□□□ 0.35
Sox18P43680 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.26■□□□□ 0.35
Sox18P43680 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox18P43680 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox18P43680 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sox18P43680 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Sox18P43680 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox18P43680 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Sox18P43680 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.25■□□□□ 0.35
Sox18P43680 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.25■□□□□ 0.35
Sox18P43680 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox18P43680 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox18P43680 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox18P43680 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sox18P43680 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.24■□□□□ 0.35
Sox18P43680 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox18P43680 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Sox18P43680 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sox18P43680 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sox18P43680 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox18P43680 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sox18P43680 Gm25925-201ENSMUST00000158314 306 ntBASIC17.23■□□□□ 0.35
Sox18P43680 Mir5130-201ENSMUST00000175160 84 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms