Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sdc2P43407 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.27■□□□□ 0.84
Sdc2P43407 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.27■□□□□ 0.84
Sdc2P43407 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdc2P43407 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdc2P43407 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sdc2P43407 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Sdc2P43407 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Sdc2P43407 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Sdc2P43407 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Sdc2P43407 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Sdc2P43407 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Sdc2P43407 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Sdc2P43407 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.26■□□□□ 0.83
Sdc2P43407 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.26■□□□□ 0.83
Sdc2P43407 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sdc2P43407 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc2P43407 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc2P43407 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Sdc2P43407 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc2P43407 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.25■□□□□ 0.83
Sdc2P43407 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.25■□□□□ 0.83
Sdc2P43407 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc2P43407 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sdc2P43407 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc2P43407 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sdc2P43407 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Sdc2P43407 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc2P43407 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sdc2P43407 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Sdc2P43407 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc2P43407 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc2P43407 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc2P43407 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sdc2P43407 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sdc2P43407 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.23■□□□□ 0.83
Sdc2P43407 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.23■□□□□ 0.83
Sdc2P43407 Gm7514-201ENSMUST00000209475 934 ntBASIC20.23■□□□□ 0.83
Sdc2P43407 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sdc2P43407 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Sdc2P43407 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sdc2P43407 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc2P43407 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.22■□□□□ 0.83
Sdc2P43407 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc2P43407 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc2P43407 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.22■□□□□ 0.83
Sdc2P43407 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.22■□□□□ 0.83
Sdc2P43407 Gm10033-202ENSMUST00000211874 928 ntBASIC20.22■□□□□ 0.83
Sdc2P43407 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc2P43407 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc2P43407 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Sdc2P43407 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sdc2P43407 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sdc2P43407 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.21■□□□□ 0.83
Sdc2P43407 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Gm22325-201ENSMUST00000158904 308 ntBASIC20.21■□□□□ 0.83
Sdc2P43407 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.21■□□□□ 0.83
Sdc2P43407 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sdc2P43407 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sdc2P43407 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.2■□□□□ 0.82
Sdc2P43407 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Sdc2P43407 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sdc2P43407 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms