Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm18669-201ENSMUST00000216049 778 ntBASIC18.68■□□□□ 0.58
Cxcl12P40224 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.68■□□□□ 0.58
Cxcl12P40224 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cxcl12P40224 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cxcl12P40224 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cxcl12P40224 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cxcl12P40224 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cxcl12P40224 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cxcl12P40224 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.67■□□□□ 0.58
Cxcl12P40224 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cxcl12P40224 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cxcl12P40224 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cxcl12P40224 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Cxcl12P40224 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.66■□□□□ 0.58
Cxcl12P40224 Gm29518-201ENSMUST00000190858 372 ntBASIC18.66■□□□□ 0.58
Cxcl12P40224 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.66■□□□□ 0.58
Cxcl12P40224 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cxcl12P40224 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cxcl12P40224 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cxcl12P40224 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cxcl12P40224 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cxcl12P40224 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.65■□□□□ 0.58
Cxcl12P40224 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
Cxcl12P40224 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.65■□□□□ 0.58
Cxcl12P40224 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cxcl12P40224 Gm4974-201ENSMUST00000209974 875 ntBASIC18.65■□□□□ 0.58
Cxcl12P40224 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cxcl12P40224 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cxcl12P40224 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cxcl12P40224 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cxcl12P40224 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cxcl12P40224 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cxcl12P40224 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cxcl12P40224 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.64■□□□□ 0.57
Cxcl12P40224 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.64■□□□□ 0.57
Cxcl12P40224 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.64■□□□□ 0.57
Cxcl12P40224 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cxcl12P40224 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
Cxcl12P40224 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.63■□□□□ 0.57
Cxcl12P40224 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.63■□□□□ 0.57
Cxcl12P40224 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cxcl12P40224 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.63■□□□□ 0.57
Cxcl12P40224 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.63■□□□□ 0.57
Cxcl12P40224 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cxcl12P40224 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cxcl12P40224 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Cxcl12P40224 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Cxcl12P40224 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.62■□□□□ 0.57
Cxcl12P40224 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cxcl12P40224 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Cxcl12P40224 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cxcl12P40224 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cxcl12P40224 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cxcl12P40224 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.61■□□□□ 0.57
Cxcl12P40224 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cxcl12P40224 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cxcl12P40224 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.61■□□□□ 0.57
Cxcl12P40224 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Cxcl12P40224 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cxcl12P40224 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cxcl12P40224 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cxcl12P40224 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms