Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.29■□□□□ 0.36
Cdh4P39038 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.29■□□□□ 0.36
Cdh4P39038 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdh4P39038 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh4P39038 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.28■□□□□ 0.36
Cdh4P39038 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh4P39038 Gm12896-201ENSMUST00000118430 226 ntBASIC17.28■□□□□ 0.36
Cdh4P39038 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdh4P39038 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh4P39038 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.28■□□□□ 0.36
Cdh4P39038 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdh4P39038 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdh4P39038 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdh4P39038 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdh4P39038 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh4P39038 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh4P39038 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cdh4P39038 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdh4P39038 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh4P39038 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdh4P39038 Gm12527-201ENSMUST00000117967 564 ntBASIC17.27■□□□□ 0.36
Cdh4P39038 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh4P39038 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh4P39038 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.27■□□□□ 0.36
Cdh4P39038 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.27■□□□□ 0.36
Cdh4P39038 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh4P39038 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh4P39038 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh4P39038 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cdh4P39038 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh4P39038 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh4P39038 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh4P39038 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdh4P39038 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Cdh4P39038 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.26■□□□□ 0.35
Cdh4P39038 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh4P39038 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.26■□□□□ 0.35
Cdh4P39038 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.26■□□□□ 0.35
Cdh4P39038 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh4P39038 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cdh4P39038 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh4P39038 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh4P39038 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdh4P39038 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdh4P39038 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cdh4P39038 Flg-201ENSMUST00000050758 1488 ntBASIC17.25■□□□□ 0.35
Cdh4P39038 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdh4P39038 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.25■□□□□ 0.35
Cdh4P39038 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.25■□□□□ 0.35
Cdh4P39038 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cdh4P39038 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.24■□□□□ 0.35
Cdh4P39038 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdh4P39038 Dio3-201ENSMUST00000097228 1449 ntBASIC17.24■□□□□ 0.35
Cdh4P39038 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Cdh4P39038 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.24■□□□□ 0.35
Cdh4P39038 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdh4P39038 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdh4P39038 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdh4P39038 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdh4P39038 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cdh4P39038 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.23■□□□□ 0.35
Cdh4P39038 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.23■□□□□ 0.35
Cdh4P39038 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdh4P39038 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms