Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Foxa1P35582 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.7■□□□□ 0.26
Foxa1P35582 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Foxa1P35582 Tgds-204ENSMUST00000228543 1594 ntBASIC16.7■□□□□ 0.26
Foxa1P35582 Gm2559-201ENSMUST00000201323 363 ntBASIC16.7■□□□□ 0.26
Foxa1P35582 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Foxa1P35582 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Foxa1P35582 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.7■□□□□ 0.26
Foxa1P35582 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Foxa1P35582 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.69■□□□□ 0.26
Foxa1P35582 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Foxa1P35582 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.68■□□□□ 0.26
Foxa1P35582 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Foxa1P35582 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Foxa1P35582 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Gm12896-201ENSMUST00000118430 226 ntBASIC16.68■□□□□ 0.26
Foxa1P35582 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.68■□□□□ 0.26
Foxa1P35582 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.68■□□□□ 0.26
Foxa1P35582 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Foxa1P35582 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Foxa1P35582 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Flg-201ENSMUST00000050758 1488 ntBASIC16.67■□□□□ 0.26
Foxa1P35582 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Foxa1P35582 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Foxa1P35582 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Foxa1P35582 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Foxa1P35582 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.67■□□□□ 0.26
Foxa1P35582 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.67■□□□□ 0.26
Foxa1P35582 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.67■□□□□ 0.26
Foxa1P35582 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.67■□□□□ 0.26
Foxa1P35582 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Foxa1P35582 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Foxa1P35582 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Foxa1P35582 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Foxa1P35582 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Foxa1P35582 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.66■□□□□ 0.26
Foxa1P35582 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.66■□□□□ 0.26
Foxa1P35582 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.66■□□□□ 0.26
Foxa1P35582 Gm20049-201ENSMUST00000219950 730 ntBASIC16.66■□□□□ 0.26
Foxa1P35582 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.66■□□□□ 0.26
Foxa1P35582 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Foxa1P35582 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Foxa1P35582 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Foxa1P35582 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms