Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Thbs1P35441 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.69■□□□□ 0.26
Thbs1P35441 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Thbs1P35441 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Thbs1P35441 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Thbs1P35441 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.68■□□□□ 0.26
Thbs1P35441 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Thbs1P35441 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Thbs1P35441 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Thbs1P35441 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Gm12933-201ENSMUST00000120203 872 ntBASIC16.67■□□□□ 0.26
Thbs1P35441 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.67■□□□□ 0.26
Thbs1P35441 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Thbs1P35441 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.67■□□□□ 0.26
Thbs1P35441 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Thbs1P35441 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thbs1P35441 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Thbs1P35441 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Thbs1P35441 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.66■□□□□ 0.26
Thbs1P35441 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thbs1P35441 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thbs1P35441 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thbs1P35441 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Thbs1P35441 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.66■□□□□ 0.26
Thbs1P35441 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Thbs1P35441 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Thbs1P35441 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Thbs1P35441 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Thbs1P35441 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Thbs1P35441 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Thbs1P35441 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Thbs1P35441 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Thbs1P35441 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.65■□□□□ 0.26
Thbs1P35441 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Thbs1P35441 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Thbs1P35441 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Thbs1P35441 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Thbs1P35441 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Thbs1P35441 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Thbs1P35441 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.64■□□□□ 0.25
Thbs1P35441 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Thbs1P35441 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Gm6211-202ENSMUST00000167849 925 ntBASIC16.64■□□□□ 0.25
Thbs1P35441 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Thbs1P35441 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.64■□□□□ 0.25
Thbs1P35441 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Thbs1P35441 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Thbs1P35441 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Thbs1P35441 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms