Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.49■□□□□ 0.55
Mmp13P33435 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp13P33435 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.48■□□□□ 0.55
Mmp13P33435 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Mmp13P33435 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.48■□□□□ 0.55
Mmp13P33435 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Mmp13P33435 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Mmp13P33435 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Mmp13P33435 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.48■□□□□ 0.55
Mmp13P33435 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Mmp13P33435 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.48■□□□□ 0.55
Mmp13P33435 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp13P33435 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Mmp13P33435 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp13P33435 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp13P33435 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp13P33435 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.47■□□□□ 0.55
Mmp13P33435 Gm29257-201ENSMUST00000186115 639 ntBASIC18.47■□□□□ 0.55
Mmp13P33435 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp13P33435 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.47■□□□□ 0.55
Mmp13P33435 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp13P33435 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.46■□□□□ 0.55
Mmp13P33435 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.46■□□□□ 0.55
Mmp13P33435 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp13P33435 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Mmp13P33435 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Mmp13P33435 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.45■□□□□ 0.54
Mmp13P33435 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Mmp13P33435 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Mmp13P33435 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Mmp13P33435 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp13P33435 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.44■□□□□ 0.54
Mmp13P33435 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.44■□□□□ 0.54
Mmp13P33435 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.44■□□□□ 0.54
Mmp13P33435 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp13P33435 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.43■□□□□ 0.54
Mmp13P33435 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Mmp13P33435 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Mmp13P33435 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Mmp13P33435 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.43■□□□□ 0.54
Mmp13P33435 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Mmp13P33435 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Mmp13P33435 Gm6420-201ENSMUST00000193885 723 ntBASIC18.42■□□□□ 0.54
Mmp13P33435 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.42■□□□□ 0.54
Mmp13P33435 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.42■□□□□ 0.54
Mmp13P33435 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.42■□□□□ 0.54
Mmp13P33435 Gm10602-201ENSMUST00000098239 609 ntBASIC18.42■□□□□ 0.54
Mmp13P33435 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms