Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.33□□□□□ -0.12
Rom1P32958 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.33□□□□□ -0.12
Rom1P32958 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.33□□□□□ -0.12
Rom1P32958 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.33□□□□□ -0.12
Rom1P32958 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rom1P32958 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rom1P32958 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Rom1P32958 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rom1P32958 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.32□□□□□ -0.12
Rom1P32958 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rom1P32958 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Golgb1-201ENSMUST00000023534 498 ntBASIC14.32□□□□□ -0.12
Rom1P32958 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rom1P32958 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rom1P32958 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rom1P32958 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rom1P32958 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rom1P32958 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Rom1P32958 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Rom1P32958 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.31□□□□□ -0.12
Rom1P32958 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rom1P32958 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rom1P32958 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.3□□□□□ -0.12
Rom1P32958 Gm27801-201ENSMUST00000184174 223 ntBASIC14.3□□□□□ -0.12
Rom1P32958 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.3□□□□□ -0.12
Rom1P32958 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.3□□□□□ -0.12
Rom1P32958 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rom1P32958 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rom1P32958 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rom1P32958 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.29□□□□□ -0.12
Rom1P32958 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rom1P32958 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rom1P32958 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms