Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp3P28862 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp3P28862 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mmp3P28862 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.39■□□□□ 0.69
Mmp3P28862 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Mmp3P28862 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.39■□□□□ 0.69
Mmp3P28862 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp3P28862 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp3P28862 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp3P28862 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Mmp3P28862 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Mmp3P28862 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Mmp3P28862 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp3P28862 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp3P28862 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Mmp3P28862 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.38■□□□□ 0.69
Mmp3P28862 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.38■□□□□ 0.69
Mmp3P28862 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.38■□□□□ 0.69
Mmp3P28862 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Mmp3P28862 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Mmp3P28862 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Mmp3P28862 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Mmp3P28862 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Mmp3P28862 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mmp3P28862 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Mmp3P28862 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.36■□□□□ 0.69
Mmp3P28862 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp3P28862 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.36■□□□□ 0.69
Mmp3P28862 Gm7977-201ENSMUST00000193787 748 ntBASIC19.36■□□□□ 0.69
Mmp3P28862 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.36■□□□□ 0.69
Mmp3P28862 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp3P28862 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Mmp3P28862 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Mmp3P28862 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp3P28862 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Mmp3P28862 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp3P28862 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Mmp3P28862 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.35■□□□□ 0.69
Mmp3P28862 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Mmp3P28862 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp3P28862 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp3P28862 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp3P28862 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.35■□□□□ 0.69
Mmp3P28862 Gm43799-201ENSMUST00000201845 579 ntBASIC19.35■□□□□ 0.69
Mmp3P28862 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.35■□□□□ 0.69
Mmp3P28862 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp3P28862 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp3P28862 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Mmp3P28862 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Mmp3P28862 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.35■□□□□ 0.69
Mmp3P28862 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Mmp3P28862 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.34■□□□□ 0.69
Mmp3P28862 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Mmp3P28862 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Mmp3P28862 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Mmp3P28862 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.33■□□□□ 0.69
Mmp3P28862 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp3P28862 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp3P28862 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp3P28862 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp3P28862 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Mmp3P28862 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Mmp3P28862 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms