Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nfkb1P25799 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.54■□□□□ 0.56
Nfkb1P25799 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Nfkb1P25799 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nfkb1P25799 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nfkb1P25799 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nfkb1P25799 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nfkb1P25799 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nfkb1P25799 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nfkb1P25799 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Nfkb1P25799 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nfkb1P25799 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nfkb1P25799 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nfkb1P25799 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.53■□□□□ 0.56
Nfkb1P25799 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Nfkb1P25799 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Nfkb1P25799 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.53■□□□□ 0.56
Nfkb1P25799 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Nfkb1P25799 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nfkb1P25799 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.52■□□□□ 0.56
Nfkb1P25799 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.52■□□□□ 0.56
Nfkb1P25799 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Nfkb1P25799 BC021767-201ENSMUST00000126387 1716 ntBASIC18.52■□□□□ 0.56
Nfkb1P25799 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.52■□□□□ 0.56
Nfkb1P25799 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Gm15375-201ENSMUST00000119510 849 ntBASIC18.52■□□□□ 0.56
Nfkb1P25799 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nfkb1P25799 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nfkb1P25799 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nfkb1P25799 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nfkb1P25799 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Nfkb1P25799 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Nfkb1P25799 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.51■□□□□ 0.55
Nfkb1P25799 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.51■□□□□ 0.55
Nfkb1P25799 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Gm37055-201ENSMUST00000191866 133 ntBASIC18.51■□□□□ 0.55
Nfkb1P25799 Gm43183-201ENSMUST00000200632 547 ntBASIC18.51■□□□□ 0.55
Nfkb1P25799 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Nfkb1P25799 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.51■□□□□ 0.55
Nfkb1P25799 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.51■□□□□ 0.55
Nfkb1P25799 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nfkb1P25799 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nfkb1P25799 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.5■□□□□ 0.55
Nfkb1P25799 Gm18025-201ENSMUST00000221733 862 ntBASIC18.5■□□□□ 0.55
Nfkb1P25799 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nfkb1P25799 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.49■□□□□ 0.55
Nfkb1P25799 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Golph3-205ENSMUST00000228671 2842 ntBASIC18.49■□□□□ 0.55
Nfkb1P25799 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Nfkb1P25799 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.49■□□□□ 0.55
Nfkb1P25799 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.49■□□□□ 0.55
Nfkb1P25799 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.49■□□□□ 0.55
Nfkb1P25799 Gm42545-201ENSMUST00000202755 922 ntBASIC18.49■□□□□ 0.55
Nfkb1P25799 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nfkb1P25799 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.49■□□□□ 0.55
Nfkb1P25799 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms