Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.53■□□□□ 0.56
Hmga1P17095 Gm21814-202ENSMUST00000203277 873 ntBASIC18.53■□□□□ 0.56
Hmga1P17095 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Tgds-204ENSMUST00000228543 1594 ntBASIC18.53■□□□□ 0.56
Hmga1P17095 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Hmga1P17095 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Hmga1P17095 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.53■□□□□ 0.56
Hmga1P17095 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Hmga1P17095 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.53■□□□□ 0.56
Hmga1P17095 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.52■□□□□ 0.56
Hmga1P17095 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Hmga1P17095 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.52■□□□□ 0.56
Hmga1P17095 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Hmga1P17095 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.52■□□□□ 0.56
Hmga1P17095 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmga1P17095 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmga1P17095 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmga1P17095 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Hmga1P17095 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmga1P17095 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmga1P17095 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Hmga1P17095 Iqck-206ENSMUST00000208658 2891 ntBASIC18.52■□□□□ 0.55
Hmga1P17095 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Hmga1P17095 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.51■□□□□ 0.55
Hmga1P17095 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.51■□□□□ 0.55
Hmga1P17095 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.51■□□□□ 0.55
Hmga1P17095 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.51■□□□□ 0.55
Hmga1P17095 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Hmga1P17095 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Hmga1P17095 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga1P17095 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga1P17095 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga1P17095 Gm5417-201ENSMUST00000079706 384 ntBASIC18.5■□□□□ 0.55
Hmga1P17095 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.5■□□□□ 0.55
Hmga1P17095 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga1P17095 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmga1P17095 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.5■□□□□ 0.55
Hmga1P17095 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Hmga1P17095 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.49■□□□□ 0.55
Hmga1P17095 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.49■□□□□ 0.55
Hmga1P17095 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.49■□□□□ 0.55
Hmga1P17095 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.49■□□□□ 0.55
Hmga1P17095 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.49■□□□□ 0.55
Hmga1P17095 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Hmga1P17095 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hmga1P17095 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Hmga1P17095 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Hmga1P17095 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga1P17095 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.48■□□□□ 0.55
Hmga1P17095 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Hmga1P17095 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga1P17095 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hmga1P17095 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.48■□□□□ 0.55
Hmga1P17095 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Hmga1P17095 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Hmga1P17095 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.47■□□□□ 0.55
Hmga1P17095 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hmga1P17095 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga1P17095 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Hmga1P17095 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hmga1P17095 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Hmga1P17095 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Hmga1P17095 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.46■□□□□ 0.55
Hmga1P17095 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms